{"id":6340,"date":"2021-11-16T01:58:45","date_gmt":"2021-11-16T01:58:45","guid":{"rendered":"https:\/\/41j.com\/blog\/?p=6340"},"modified":"2021-11-16T12:12:14","modified_gmt":"2021-11-16T12:12:14","slug":"nanodrop-notes","status":"publish","type":"post","link":"https:\/\/41j.com\/blog\/2021\/11\/nanodrop-notes\/","title":{"rendered":"Nanodrop Notes"},"content":{"rendered":"\n<p>I recently wrote about various UV-Vis spectrophotometers <a href=\"https:\/\/aseq.substack.com\/p\/the-lunatic-from-unchained-labs\">on the substack<\/a>. As part of this I discussed the Nanodrop and how its architecture differs from other instruments and the advantages this gives.<\/p>\n\n\n\n<p><\/p>\n\n\n\n<p>The CCD is quite possibly a <a href=\"https:\/\/41j.com\/blog\/2020\/01\/notes-on-using-a-ilx511-linear-ccd-ad9225-adc-ice40hx8k-and-nmigen\/\">Sony ILX511<\/a> this sensor was a popular CCD in a number of spectrometers, I&#8217;ve previously <a href=\"https:\/\/41j.com\/blog\/2020\/02\/ilx511-ccd-interface-r2\/\">designed a small interface<\/a> for this sensor.<\/p>\n\n\n\n<p>The layout seems pretty simple, the light from the fiber comes in, hits a mirror then is reflected off a diffraction grating and heads to the CCD:<\/p>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-1024x672.png\" alt=\"\" class=\"wp-image-6342\" width=\"762\" height=\"500\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-1024x672.png 1024w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-300x197.png 300w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-150x98.png 150w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-768x504.png 768w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28-1536x1008.png 1536w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-28.png 1628w\" sizes=\"auto, (max-width: 762px) 100vw, 762px\" \/><\/figure><\/div>\n\n\n\n<p>The auction contains a number of other photos, which includes a fiber cable. I assume this fiber (and all the other components) must be UV compatible which will increase the cost. But overall, its a very simple optical system.<\/p>\n\n\n\n<p>Thermo documentation suggests that older Nanodrops use <a href=\"https:\/\/tools.thermofisher.com\/content\/sfs\/brochures\/Thermo-Scientific-NanoDrop-Products-Brochure-EN.pdf\">Xenon Flash lamps<\/a>. These give a relatively broad output. It doesn&#8217;t seem like the Nanodrop has any kind of sensor on the output of the lamp (unlike more traditional UV-Vis instruments) this will make taking a blank measurement all the more important. The blank will be compensating for both emission differences across wavelength in the lamp and the absorbance of the buffer.<\/p>\n\n\n\n<p>Newer Nanodrops appear to use LEDs, I assume this must be a combination of UV and visible LEDs to cover the entire spectrum.<\/p>\n\n\n\n<p><a href=\"https:\/\/currentprotocols.onlinelibrary.wiley.com\/doi\/epdf\/10.1002\/0471142905.hga03ds53\">Other references<\/a> show the Nanodrop setup, and suggest that fused silica (quartz) is used:<\/p>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-large is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-1024x733.png\" alt=\"\" class=\"wp-image-6352\" width=\"487\" height=\"348\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-1024x733.png 1024w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-300x215.png 300w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-150x107.png 150w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-768x550.png 768w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32-1536x1100.png 1536w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-32.png 1760w\" sizes=\"auto, (max-width: 487px) 100vw, 487px\" \/><\/figure><\/div>\n\n\n\n<p>The <a href=\"https:\/\/patents.google.com\/patent\/US6628382B2\/en?assignee=NanoDrop+Technologies+LLC&amp;oq=NanoDrop+Technologies+LLC\">Nanodrop patents<\/a> are pretty informative, and make it reasonably clear that the fiber optical &#8220;pedestals&#8221; are just the ends of a couple of SMA connectors &#8220;typically the end of an industry standard SMA fiber optic connector\u00a0<strong>10<\/strong>, FIG. 3<em>a\u00a0<\/em>(found as connectors on the ends of optical patch cords like p\/n P-400-2-UV-VIS from Ocean Optics inc. of Dunedin, Fla.)&#8230; For most SMA connectors the approximate 2 mm end diameter can be effectively covered with 2 microliters of water or a water-based solutions.&#8221;<\/p>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-medium\"><img loading=\"lazy\" decoding=\"async\" width=\"254\" height=\"300\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-33-254x300.png\" alt=\"\" class=\"wp-image-6356\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-33-254x300.png 254w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-33-127x150.png 127w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-33.png 644w\" sizes=\"auto, (max-width: 254px) 100vw, 254px\" \/><\/figure><\/div>\n\n\n\n<p>A few other pictures from <a href=\"https:\/\/www.ebay.com\/itm\/203167267738?_trkparms=ispr%3D1&amp;hash=item2f4db67b9a:g:CAEAAOSwCyZfotUf&amp;amdata=enc%3AAQAGAAACkPYe5NmHp%252B2JMhMi7yxGiTJkPrKr5t53CooMSQt2orsSjVt3vLKCbov98Z19qhuwY4Fg55rW%252FCPmo6%252F09ngiYRoOiQ03QwuQs7b5qMGWJ1oWyRrOKUccAZA5yKUIy1orudW6sI7NTagzsv94mGIIqhZIvLxf6e0Tix48yFhfp%252B09%252BmhPymbxIxwA5Se0224%252FyoLMaA%252FvkZNSh3shH9fL7FOqaLhQJPAmnnGWsGoWreHdMe7K2ogxojWarhUC7SQvfnId28N8GN4WDMA%252Fruz0WF3gbZx4GfeTYioz%252Fj00LomIlMoMzrcAYL%252BfECXAXlE%252FCeonFsvj%252BAGeefndlbZwQF2%252B24MEfUSq0qJ0JUoGwbrT%252BBhrqjFmAyI%252BfFGUO5BiXQ1rDRqwuFqPpQLgGLrlxhmPw%252BIlT8eguVS5UTzD001WfEZAoUM74fy9ZKrGSygaBLstPNgyny2dLkKANsjP%252Bs6V20TcdjbYt%252FBhB1XTOdjlPkOKLg2PT9nbl9CxRsESgil2bdMKVE6bmtrwYIE00rTSN1ZWPUZuuNVmvuBi3zqCrU%252FTRa%252BqvLaG7D1YjzAR1ussfylHy5e0ay6padMp63uls6w%252FclVsEZLtPor%252BSkbcezJaifdhCrNUf%252BDnAOf3jc9ujg68n4WcvfLBk9%252FJTCdqNjO8zpuJuuizQkrPpgplj%252BC%252B14yxVMReR8l3NzI3d%252BJv4t5uaPbwRMmVdMHG%252B%252FyPtbWmWN199cbZP2R5%252B%252FjA3dLEewZS%252BGtWHvLy6zwN5s6po6YLzW%252FLbsznf2DW61mv%252BAoajhCxk6gkVwIhD8ecYn8SQ39kKlKHj%252Fjquv5s983W8xZyl9HT%252FjxJlcFCa7lIQfgRRm8VTqgjBQ2cpm6Y%7Cclp%3A2334524%7Ctkp%3ABFBMqsy_5aRf\">the auction<\/a> are below, while the auction is listed as Nanodrop monochromator. I suspect this may however be mislabeled, and am continuing to search for Nanodrop teardown images&#8230;<\/p>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-thumbnail is-resized\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-29-150x140.png\" alt=\"\" class=\"wp-image-6343\" width=\"161\" height=\"150\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-29-150x140.png 150w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-29-300x280.png 300w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-29-768x716.png 768w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-29.png 912w\" sizes=\"auto, (max-width: 161px) 100vw, 161px\" \/><\/figure><\/div>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-thumbnail\"><img loading=\"lazy\" decoding=\"async\" width=\"150\" height=\"123\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30-150x123.png\" alt=\"\" class=\"wp-image-6344\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30-150x123.png 150w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30-300x246.png 300w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30-1024x840.png 1024w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30-768x630.png 768w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-30.png 1428w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><\/figure><\/div>\n\n\n\n<div class=\"wp-block-image\"><figure class=\"aligncenter size-thumbnail\"><img loading=\"lazy\" decoding=\"async\" width=\"150\" height=\"123\" src=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31-150x123.png\" alt=\"\" class=\"wp-image-6345\" srcset=\"https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31-150x123.png 150w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31-300x245.png 300w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31-1024x837.png 1024w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31-768x628.png 768w, https:\/\/41j.com\/blog\/wp-content\/uploads\/2021\/11\/image-31.png 1426w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><\/figure><\/div>\n","protected":false},"excerpt":{"rendered":"<p>I recently wrote about various UV-Vis spectrophotometers on the substack. As part of this I discussed the Nanodrop and how its architecture differs from other instruments and the advantages this gives. The CCD is quite possibly a Sony ILX511 this sensor was a popular CCD in a number of spectrometers, I&#8217;ve previously designed a small [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[1],"tags":[],"class_list":["post-6340","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_shortlink":"https:\/\/wp.me\/p1RRoU-1Eg","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/6340","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/comments?post=6340"}],"version-history":[{"count":5,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/6340\/revisions"}],"predecessor-version":[{"id":6357,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/6340\/revisions\/6357"}],"wp:attachment":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/media?parent=6340"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/categories?post=6340"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/tags?post=6340"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}