{"id":5065,"date":"2018-08-15T19:07:29","date_gmt":"2018-08-15T19:07:29","guid":{"rendered":"http:\/\/41j.com\/blog\/?p=5065"},"modified":"2018-08-15T19:07:29","modified_gmt":"2018-08-15T19:07:29","slug":"nanopore_groups","status":"publish","type":"post","link":"https:\/\/41j.com\/blog\/2018\/08\/nanopore_groups\/","title":{"rendered":"Nanopore DNA Sequencing Research Groups (August 2018)"},"content":{"rendered":"

This is a draft list of research groups engaged in research on the use of nanopores for DNA sequencing. It’s based on this list<\/a>. I went through this and searched for groups that had published research on DNA sensing using nanopores since 2015. I also added a couple of groups. The list is likely incomplete, and I plan on tidying it up over the next couple of days.<\/p>\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
Lab name<\/td>\nWebsite<\/td>\nRecent Publication<\/td>\n<\/tr>\n
Nanopore Group – UC Santa Cruz<\/td>\nGroup Page<\/a><\/td>\nMapping DNA methylation with high-throughput nanopore sequencing<\/a><\/td>\n<\/tr>\n
The Aksimentiev Group<\/td>\nGroup Page<\/a><\/td>\nDNA sequence-dependent ionic currents in ultra-small solid-state nanopores<\/a><\/td>\n<\/tr>\nThe Albrecht Group<\/td>\nGroup Page<\/a><\/td>\nLow Noise Nanopore Platforms Optimised for the Synchronised Optical and Electrical Detection of Biomolecules<\/a><\/td>\n<\/tr>\n
Anselmetti lab<\/td>\nGroup Page<\/a><\/td>\nControlled translocation of DNA through nanopores in carbon nano-, silicon-nitride- and lipid-coated membranes<\/a><\/td>\n<\/tr>\n
Bayley Group<\/td>\nGroup Page<\/a><\/td>\nNucleobase Recognition by Truncated \u03b1-Hemolysin Pores<\/a><\/td>\n<\/tr>\n
Behrends Laboratory<\/td>\nGroup Page<\/a><\/td>\nLength- and Species-Selective Detection of Short Oligonucleotides using a Microelectrode Cavity Array of Biological Nanopores<\/a><\/td>\n<\/tr>\n
Cees Dekker Lab<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
Chen Research Group<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
DRNDI\u0106 Lab<\/td>\nGroup Page<\/a><\/td>\nMonolayer WS2 Nanopores for DNA Translocation with Light-Adjustable Sizes<\/a><\/td>\n<\/tr>\n
Edel Group<\/td>\nGroup Page<\/a><\/td>\nDouble Barrel Nanopores as a New Tool for Controlling Single-Molecule Transport<\/a><\/td>\n<\/tr>\n
The Nanopore Group at Harvard<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
UW Nanopore Biophysics<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
The Hall Lab<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
Keyser Lab<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
Jiali Li Lab<\/td>\nGroup Page<\/a><\/td>\nA tip-attached tuning fork sensor for the control of DNA translocation through a nanopore<\/a><\/td>\n<\/tr>\n
Xinsheng Ling<\/td>\nGroup Page<\/a><\/td>\nRapid fabrication of solid-state nanopores with high reproducibility over a large area using a helium ion microscope<\/a><\/td>\n<\/tr>\n
Maglia Lab<\/td>\nGroup Page<\/a><\/td>\nAlpha\u2010Helical Fragaceatoxin\u2005C Nanopore Engineered for Double\u2010Stranded and Single\u2010Stranded Nucleic Acid Analysis<\/a><\/td>\n<\/tr>\n
Meller Group<\/td>\nGroup Page<\/a><\/td>\n<\/td>\n<\/tr>\n
McGrath Lab<\/td>\nGroup Page<\/a><\/td>\nDNA Translocations through Nanopores under Nanoscale Preconfinement<\/a><\/td>\n<\/tr>\n
Muthukumar Lab<\/td>\nGroup Page<\/a><\/td>\nTemperature effect on ionic current and ssDNA transport through nanopores<\/a><\/td>\n<\/tr>\n
Laboratory of Nanoscale Biology (Aleksandra\u00a0Radenovic)<\/td>\nGroup Page<\/a><\/td>\nIdentification of single nucleotides in MoS2 nanopores<\/a><\/td>\n<\/tr>\n
Rosenstein Laboratory<\/td>\nGroup Page<\/a><\/td>\nIn Situ Nanopore Fabrication and Single-Molecule Sensing with Microscale Liquid Contacts<\/a><\/td>\n<\/tr>\n
Stein Lab<\/td>\nGroup Page<\/a><\/td>\nNanopore Sequencing: Forcing Improved Resolution<\/a><\/td>\n<\/tr>\nStuart Lindsay<\/td>\nGroup Page<\/a><\/td>\nUniversal Readers Based on Hydrogen Bonding or \u03c0\u2013\u03c0 Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions<\/a><\/td>\n<\/tr>\n
Taniguchi Lab<\/td>\nGroup Page<\/a><\/td>\nQuantitative analysis of DNA with single-molecule sequencing<\/a><\/td>\n<\/tr>\n
The T.-Cossa LAB<\/td>\nGroup Page<\/a><\/td>\nDNA Translocations through Nanopores under Nanoscale Preconfinement<\/a><\/td>\n<\/tr>\n
Wanunu Lab<\/td>\nGroup Page<\/a><\/td>\nLength-independent DNA packing into nanopore zero-mode waveguides for low-input DNA sequencing<\/a><\/td>\n<\/tr>\n
Yitao Long<\/td>\nGroup Page<\/a><\/td>\nConstruction of an aerolysin nanopore in a lipid bilayer for single-oligonucleotide analysis<\/a><\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n

Need to add:
\nZero-mode waveguide detection of DNA translocation through FIB-organised arrays of engineered nanopores<\/p>\n","protected":false},"excerpt":{"rendered":"

This is a draft list of research groups engaged in research on the use of nanopores for DNA sequencing. It’s based on this list. I went through this and searched for groups that had published research on DNA sensing using nanopores since 2015. I also added a couple of groups. The list is likely incomplete, […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"jetpack_post_was_ever_published":false,"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[1],"tags":[],"class_list":["post-5065","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_shortlink":"https:\/\/wp.me\/p1RRoU-1jH","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/5065","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/comments?post=5065"}],"version-history":[{"count":11,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/5065\/revisions"}],"predecessor-version":[{"id":5092,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/posts\/5065\/revisions\/5092"}],"wp:attachment":[{"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/media?parent=5065"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/categories?post=5065"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/41j.com\/blog\/wp-json\/wp\/v2\/tags?post=5065"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}